Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015931685.1_cds_XP_016478433.1_70072
CDS Infomation

[gene=LOC107799799] [db_xref=GeneID:107799799] [protein=serine hydroxymethyltransferase 3, chloroplastic-like] [protein_id=XP_016478433.1] [location=join(1283..1503,1604..1778,1865..1982,2200..2312,2411..2533,3191..3295,3467..3553,3638..3745,4017..4089,4172..4446)] [gbkey=CDS]
Sequence

ATGGATGTCAACTGCTATTTTTTAGGTGCTGGGAGCAGCTTCGAAGACTATGGATTGAGT
GAAGCTGATCCTGATGTTCGTGCTATAATTGACAAAGAGAAGAAACGTCAATTTAGGAGC
TTAGAACTTATTGCATCTGAGAATTTCACATCTCGAGCAGTGATGGAAGCAGTTGGTTCC
TGCCTTACAAACAAATACTCTGAAGGGCTTCCAGGCAAAAGATATTATGGTGGGAATGAA
TACATTGATGAGTTGGAAACTCTCTGTCAAGAAAGAGCATTGGTTGCCTTTAGTTTAGAT
GGAAAGCAATGGGGTGTGAACGTTCAACCATTATCTGGTTCGCCAGCGAATTTTGCAGTC
TACACAGCTGTTCTTAATCCACATGACCGGATTATGGGATTGGACTTACCTCATGGTGGC
CACTTGTCCCATGGATTTATGACTCCTAAACGACGAGTTTCAGCCACCTCTGTTTACTTT
GAGTCCATGCCTTATCGACTTGATGAATCTACAGGCATTCTCGATTATGAAATGCTTGAG
AAAACGGCGAATCTTTTTCGGCCGAAACTTATTATAGCTGGTGCTAGTGCGTATCCGCGT
GATTTTGATTATCCTCGTCTGAGAAAGATAGCAGATGCTGTCGGAGCTTTCCTGATGATG
GATATGGCTCATATCAGTGGGCTTGTTGCTGCCTCTGTGCTTGCTAATCCATTTGAATAC
TGTGACATTGTTACTACTACTACTCACAAGTCTCTTAGAGGTCCTAGAGGTGGAATGATC
TTCTTCAAAAAAGATCCAGTTCTTGGTGTGGATCTGGAATCTGCCATAAATAATGCTGTT
TTTCCTGGTTTGCAGGGTGGTCCCCATAATCACACAATTGGAGGACTAGCCGTTTGTTTG
AAACATGCGAAATCACCTGAATTTAAGGCTTATCAGAACCAGGTGGTCTCCAACTGTAGA
GCTCTTGCAAGCCGGTTAACGGAATTAGGCTACAAGCTGGTCTCAGGAGGGAGTGATAAT
CATTTGGTTCTTGTGGATTTGAGGCCTCTAGGAACTGATGGTGCTAGAGTGGAGAAAATA
CTTGACATGGCATCAATCACTCTCAACAAGAATTCAGTACCTGGTGATAAAAGTGCACTA
GTACCTGGTGGCATCCGAATAGGCTCACCGGCCATGACCACTCGAGGTTTTACAGAGACG
GAATTTGTAGCAGTTGCAGATTTCATTCACGAGGGCGTGCAAATTACTCTTGAAGCCAAG
AAGTCTGTCTCTAGTACCAAACTCCAAGATTTCATGAAGTTTGTTACTGCCCCGGATTTT
AATTTGATTGATAGGGTGTTGGACTTGCAAAAAAGGGTCGAAGCTTTCACTAGCCAGTAC
CCATTGCCTGGTTTATGA

Peptide Sequence

PEP ID

XP_016478433.1
PEP Infomation

PREDICTED: serine hydroxymethyltransferase 3, chloroplastic-like [Nicotiana tabacum]
Sequence

MDVNCYFLGAGSSFEDYGLSEADPDVRAIIDKEKKRQFRSLELIASENFTSRAVMEAVGS
CLTNKYSEGLPGKRYYGGNEYIDELETLCQERALVAFSLDGKQWGVNVQPLSGSPANFAV
YTAVLNPHDRIMGLDLPHGGHLSHGFMTPKRRVSATSVYFESMPYRLDESTGILDYEMLE
KTANLFRPKLIIAGASAYPRDFDYPRLRKIADAVGAFLMMDMAHISGLVAASVLANPFEY
CDIVTTTTHKSLRGPRGGMIFFKKDPVLGVDLESAINNAVFPGLQGGPHNHTIGGLAVCL
KHAKSPEFKAYQNQVVSNCRALASRLTELGYKLVSGGSDNHLVLVDLRPLGTDGARVEKI
LDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTETEFVAVADFIHEGVQITLEAK
KSVSSTKLQDFMKFVTAPDFNLIDRVLDLQKRVEAFTSQYPLPGL

Transcript Sequence

Gene sequence data has not been registered.